PXD052621-1

PXD052621 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Poplar root tandem mass spectrometry analyses in response to a contamination gradient of phenanthrene
Description	This project provides tandem mass spectrometry data of root proteins extracted from samples of Populus x canadensis (hybrid of P. nigra x P. deltoides) grown in soil microcosms spiked with phenanthrene at different nominal concentration (0-100–200–400–700– 1000–1500–2000 mg PHE kg−1 dry weight.
HostingRepository	PRIDE
AnnounceDate	2025-09-15
AnnouncementXML	Submission_2025-09-15_09:28:52.832.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD052621
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Populus nigra x Populus x canadensis; NCBI TaxID: 1001135;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-28 02:28:20	ID requested
⏵ 1	2025-09-15 09:28:53	announced

Publication List

10.6019/PXD052621;
Gallois N, Gr, é, au L, Zumsteg J, Huguet S, Blaudez D, Villette C, Paysant-Le Roux C, Armengaud J, Heintz D, Alpha-Bazin B, C, é, bron A, Comprehensive multi-omics integration to unravel poplar molecular responses to a phenanthrene contamination gradient. J Hazard Mater, 495():138826(2025) [pubmed]
10.1016/j.jhazmat.2025.138826;

10.6019/PXD052621;

Gallois N, Gr, é, au L, Zumsteg J, Huguet S, Blaudez D, Villette C, Paysant-Le Roux C, Armengaud J, Heintz D, Alpha-Bazin B, C, é, bron A, Comprehensive multi-omics integration to unravel poplar molecular responses to a phenanthrene contamination gradient. J Hazard Mater, 495():138826(2025) [pubmed]

10.1016/j.jhazmat.2025.138826;

Keyword List

submitter keyword: phenanthrene,poplar, shotgun proteomics, endophytes, populus x canadensis, root

submitter keyword: phenanthrene,poplar, shotgun proteomics, endophytes, populus x canadensis, root

Contact List

Jean ARMENGAUD
contact affiliation	CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD052621
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD052621

PRIDE project URI

Repository Record List

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