PXD052361-1

PXD052361 is an original dataset announced via ProteomeXchange.

Title	DIA Proteomics of Coho Salmon Ovaries Across 4 Stages
Description	A better understanding of coho salmon ovarian maturation will inform both aquaculture and conservation efforts. Ovarian maturation is a complex molecular and physiological process resulting in a mature ovum that can be released for spawning and fertilization. The confluence of molecular signals and pathways that must be co-expressed to accomplish full reproductive maturity with high quality oocytes have been previously investigated with with low-resolution proteomics and transcriptomics. This dataset expands proteomics resources for coho salmon by thousands of proteins, allowing for a more in-depth assessment of the range of proteins involved in ovarian maturation and their interactions. We sampled coho salmon at four ovarian developmental stages that encompass the transition from primary to secondary (vitellogenic) growth. Data independent acquisition proteomics was applied to the dataset, resulting in the inference of >5000 proteins in the coho ovarian proteome.
HostingRepository	PanoramaPublic
AnnounceDate	2024-12-03
AnnouncementXML	Submission_2024-12-03_13:35:57.502.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Emma Timmins-Schiffman
SpeciesList	scientific name: Oncorhynchus kisutch; NCBI TaxID: 8019;
ModificationList	Carbamidomethyl
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-17 22:32:50	ID requested
⏵ 1	2024-12-03 13:35:57	announced
2	2024-12-10 15:05:14	announced	: Added PubMed Id

no publication

submitter keyword: coho, salmon, gametogenesis, reproduction

Brook L. Nunn
contact affiliation	University of Washington
contact email	brookh@uw.edu
lab head
Emma Timmins-Schiffman
contact affiliation	University of Washington
contact email	emmats@uw.edu
dataset submitter

Panorama Public dataset URI