PXD052008 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | NanoLC-MSMS TMT comparison of native and in vitro culture-derived neutrophils |
| Description | Triplicate samples of donor-matched native neutrophils (purified through fluorescence-assisted flow cytometry using CD66b as a marker) and 18-day in vitro cultured neutrophils (derived from CD34+ cells) were analysed through TMT-based quantitative proteomics to examine possible protein abundance changes underlying neutrophil cell culture. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_06:43:35.055.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Pedro Moura |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Fusion |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2024-05-06 02:16:37 | ID requested | |
| 1 | 2024-06-02 10:59:44 | announced | |
| ⏵ 2 | 2024-10-22 06:43:35 | announced | 2024-10-22: Updated project metadata. |
Publication List
| 10.1186/s12967-024-05337-x; |
| Naveh CA, Roberts K, Zakrzewski P, Rice CM, Ponce-Garcia FM, Fleming K, Thompson M, Panyapiean N, Jiang H, Diezmann S, Moura PL, Toye AM, Amulic B, stem cells are immature and genetically tractable. J Transl Med, 22(1):526(2024) [pubmed] |
Keyword List
| submitter keyword: Human, LC-MSMS, Neutrophil, Cell culture |
Contact List
| Ash Toye |
|---|
| contact affiliation | School of Biochemistry, University of Bristol, Bristol, United Kingdom |
| contact email | ash.m.toye@bristol.ac.uk |
| lab head | |
| Pedro Moura |
|---|
| contact affiliation | Center for Hematology and Regenerative Medicine, Department of Medicine (Huddinge), Karolinska Institutet, Huddinge, Sweden |
| contact email | pedro.moura@ki.se |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD052008 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD052008
- Label: PRIDE project
- Name: NanoLC-MSMS TMT comparison of native and in vitro culture-derived neutrophils
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