PXD051097-1

PXD051097 is an original dataset announced via ProteomeXchange.

Title	Identification of a biomarker to predict doxorubicin/cisplatin chemotherapy efficacy for osteosarcoma patients by 4D data-independent acquisition (DIA) mass spectrometry with parallel reaction monitoring (PRM) verification
Description	We analyzed the differentially expressed proteins in 37 resected tissue samples from osteosarcoma patients using paraffin- embedded specimens and 4D data-independent acquisition (DIA) quantitative mass spectrometry to investigate biomarkers for predicting the efficacy of doxorubicin/cisplatin chemotherapy
HostingRepository	PRIDE
AnnounceDate	2024-10-17
AnnouncementXML	Submission_2024-10-17_05:37:37.294.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xiaoyu Zhang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-29 22:39:37	ID requested
⏵ 1	2024-10-17 05:37:38	announced

10.1016/j.tranon.2024.102098;

Ma Q, Sun J, Liu Q, Fu J, Wen Y, Zhang F, Wu Y, Zhang X, Gong L, Zhang W, Identification of a biomarker to predict doxorubicin/cisplatin chemotherapy efficacy in osteosarcoma patients using primary, recurrent and metastatic specimens. Transl Oncol, 49():102098(2024) [pubmed]

submitter keyword: osteosarcoma

doxorubicin/cisplatin chemotherapy efficacy

data-independent acquisition (DIA) mass spectrometry with parallel reaction monitoring (PRM)

CTSG

neutrophil extracellular traps (NETs)

Qiong Ma
contact affiliation	Orthopedic Oncology Institute, Department of Orthopedic Surgery, Tangdu Hospital, Fourth Military Medical University, Xi’an, China
contact email	maqiong@fmmu.edu.cn
lab head
Xiaoyu Zhang
contact affiliation	Orthopedic Oncology Institute, Department of Orthopedic Surgery, Tangdu Hospital, Fourth Military Medical University, Xi’an, China,
contact email	zxy_0918@163.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/10/PXD051097

PRIDE project URI

• PRIDE
  1. PXD051097
     1. Label: PRIDE project
     2. Name: Identification of a biomarker to predict doxorubicin/cisplatin chemotherapy efficacy for osteosarcoma patients by 4D data-independent acquisition (DIA) mass spectrometry with parallel reaction monitoring (PRM) verification