PXD050581 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Protease Regulation by Subtrate O-Glycosylation |
Description | In this study, we systematically assessed the fine-tuning of limited proteolysis in the extracellular space by glycosylation, one of the most widely observed PTMs, using cells, and applying the Terminal Amine Labeling of Substrates (TAILS) approach, a quantitative proteomics workflow for the system-wide assessment of protein N termini and protease cleavage events in complex biological samples. In addtion, we complement the study with DIA analysis, PRM and glycoproteomics analysis for further validation of the initial observations. |
HostingRepository | PRIDE |
AnnounceDate | 2024-08-11 |
AnnouncementXML | Submission_2024-08-10_16:05:37.080.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Elizabeta Madzharova |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Exploris 480 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-03-13 03:43:18 | ID requested | |
⏵ 1 | 2024-08-10 16:05:37 | announced | |
2 | 2024-10-22 06:54:36 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1002/pro.5128; |
Madzharova E, Sabino F, Kalogeropoulos K, Francavilla C, Auf dem Keller U, Substrate O-glycosylation actively regulates extracellular proteolysis. Protein Sci, 33(8):e5128(2024) [pubmed] |
Keyword List
submitter keyword: PTMs,proteomics, degradomics |
Contact List
Chiara Francavilla |
contact affiliation | Department of Biotechnology and Biomedicine, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark |
contact email | chiafra@dtu.dk |
lab head | |
Elizabeta Madzharova |
contact affiliation | Technical University of Denmark |
contact email | elimad@dtu.dk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD050581
- Label: PRIDE project
- Name: Protease Regulation by Subtrate O-Glycosylation