PXD049294-3

PXD049294 is an original dataset announced via ProteomeXchange.

Title	Benchmarking low- and high-throughput protein cleanup and digestion methods for human fecal metaproteomics
Description	Benchmarking low- and high-throughput protein cleanup and digestion methods for human fecal metaproteomics
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:43:23.596.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alessandro Tanca
SpeciesList	scientific name: human gut metagenome; NCBI TaxID: 408170; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-09 04:10:01	ID requested
1	2024-05-31 02:06:41	announced
2	2024-07-03 05:47:30	announced	2024-07-03: Updated project metadata.
⏵ 3	2024-10-22 06:43:24	announced	2024-10-22: Updated project metadata.

10.1128/msystems.00661-24;

Tanca A, Deledda MA, De Diego L, Abbondio M, Uzzau S, Benchmarking low- and high-throughput protein cleanup and digestion methods for human fecal metaproteomics. mSystems, 9(7):e0066124(2024) [pubmed]

submitter keyword: metaproteome, mass spectrometry,FASP, gut microbiota, sample preparation, multiwell plate

Sergio Uzzau
contact affiliation	Department of Biomedical Sciences, University of Sassari, Sassari, Italy
contact email	uzzau@uniss.it
lab head
Alessandro Tanca
contact affiliation	Department of Biomedical Sciences, University of Sassari, Sassari, Italy
contact email	aletanca@uniss.it
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD049294

PRIDE project URI

• PRIDE
  1. PXD049294
     1. Label: PRIDE project
     2. Name: Benchmarking low- and high-throughput protein cleanup and digestion methods for human fecal metaproteomics