PXD048862-1

PXD048862 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Crosslinking MS of Elmo1,Dock5,Rac1 and RhoG complexes
Description	Crosslink mass spectrometry of Elmo1,Dock5,Rac1 and RhoG complexes using BS3 crosslinker.
HostingRepository	jPOST
AnnounceDate	2025-01-18
AnnouncementXML	Submission_2025-01-17_21:20:37.257.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD048862
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Reiko Nakagawa
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue; L-methionine sulfoxide; Xlink:DSS[156]
Instrument	instrument

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-01-24 21:37:50	ID requested
⏵ 1	2025-01-17 21:20:38	announced

Publication List

Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M, RhoG facilitates a conformational transition in the guanine nucleotide exchange factor complex DOCK5/ELMO1 to an open state. J Biol Chem, 300(7):107459(2024) [pubmed]

Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M, RhoG facilitates a conformational transition in the guanine nucleotide exchange factor complex DOCK5/ELMO1 to an open state. J Biol Chem, 300(7):107459(2024) [pubmed]

Keyword List

submitter keyword: Crosslink mass spectrometry, XL-MS

submitter keyword: Crosslink mass spectrometry, XL-MS

Contact List

Mikako Shirouzu
lab head
Reiko Nakagawa
contact affiliation	RIKEN BDR
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002477/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002477/