PXD048597-2

PXD048597 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Exploring roles of the chitinase ChiC in modulating Pseudomonas aeruginosa virulence phenotypes
Description	Proteins were precipitated using chloroform and methanol, by the protocol described by Wessel and Flügge (1984). Following precipitation, the proteins were reduced and alkylated before being digested, cleaned and desalted using STrap tips (Zougman A, Selby PJ, Banks RE. 2014). The peptide samples were analyzed by a nano UPLC (nanoElute, Bruker) coupled to a trapped ion mobility spectrometry and a quadrupole time of flight mass spectrometer (timsTOF Pro, Bruker).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:37:47.292.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Per Kristian Edvardsen
SpeciesList	scientific name: Bacteria; NCBI TaxID: NCBITaxon:2; scientific name: Pseudomonas aeruginosa (strain UCBPP-PA14); NCBI TaxID: 208963;
ModificationList	iodoacetamide derivatized residue
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-01-16 03:10:52	ID requested
1	2024-04-30 00:51:30	announced
⏵ 2	2024-10-22 06:37:47	announced	2024-10-22: Updated project metadata.

Publication List

10.1128/SPECTRUM.00546-24;

10.1128/SPECTRUM.00546-24;

Keyword List

submitter keyword: GlcNAc2, chitinase,Pseudomonas aeruginosa, GH18

submitter keyword: GlcNAc2, chitinase,Pseudomonas aeruginosa, GH18

Contact List

Gustav Vaaje-Kolstad
contact affiliation	Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences
contact email	gustav.vaaje-kolstad@nmbu.no
lab head
Per Kristian Edvardsen
contact affiliation	Norwegian University of Life Sciences
contact email	per.kristian.edvardsen@nmbu.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/04/PXD048597
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/04/PXD048597

PRIDE project URI

Repository Record List

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