PXD048362-1

PXD048362 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Fomitopsis pinicola protein profiles in normoxia and anoxia using fungal solid-state cultures on pine
Description	The proteomes of Fomitopsis pinicola was established from fungal solid-state cultures on pine in normoxia (air) and anoxia (N2) by shotgun proteomics and compared to characterize the molecular modifications induced by each condition.
HostingRepository	PRIDE
AnnounceDate	2025-09-15
AnnouncementXML	Submission_2025-09-15_08:41:51.327.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD048362
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Fomitopsis pinicola; NCBI TaxID: 40483;
ModificationList	monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-01-09 13:42:28	ID requested
⏵ 1	2025-09-15 08:41:52	announced

Publication List

R, ö, llig R, Lebreton A, Grenga L, Cresswell R, Lett S, Tryfona T, Navarro D, Lambert J, Grisel S, Gimbert I, Martens HJ, Miotello G, Yu X, Drula E, Rosso MN, Tarrago L, Henrissat B, Johansen K, Dupree R, Armengaud J, Dupree P, Berrin JG, Wood decay under anoxia by the brown-rot fungus Fomitopsis pinicola. Nat Commun, 16(1):7352(2025) [pubmed]
10.6019/PXD048362;
10.1038/s41467-025-62567-3;

R, ö, llig R, Lebreton A, Grenga L, Cresswell R, Lett S, Tryfona T, Navarro D, Lambert J, Grisel S, Gimbert I, Martens HJ, Miotello G, Yu X, Drula E, Rosso MN, Tarrago L, Henrissat B, Johansen K, Dupree R, Armengaud J, Dupree P, Berrin JG, Wood decay under anoxia by the brown-rot fungus Fomitopsis pinicola. Nat Commun, 16(1):7352(2025) [pubmed]

10.6019/PXD048362;

10.1038/s41467-025-62567-3;

Keyword List

submitter keyword: lignocellulose,proteomics, wood decay, degradation, fungus, enzymes

submitter keyword: lignocellulose,proteomics, wood decay, degradation, fungus, enzymes

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD048362
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD048362

PRIDE project URI

Repository Record List

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