PXD048346-1

PXD048346 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pupylation-based proximity labelling reveals regulatory factors in cellulose biosynthesis in Arabidopsis
Description	We introduce pupylation-based proximity labelling (PUP-IT) as a tool for protein interaction detection in plant biology. We show that PUP-IT readily confirmed and extended protein interactions for several known protein complexes, across different types of plant systems.
HostingRepository	PRIDE
AnnounceDate	2025-01-10
AnnouncementXML	Submission_2025-01-10_03:42:13.234.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Staffan Persson
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702; scientific name: Nicotiana tabacum (Common tobacco); NCBI TaxID: 4097;
ModificationList	No PTMs are included in the dataset
Instrument	timsTOF Pro; Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-01-09 05:40:46	ID requested
⏵ 1	2025-01-10 03:42:13	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: PUP-IT,Proximity labelling

submitter keyword: PUP-IT,Proximity labelling

Contact List

Staffan Persson
contact affiliation	Copenhagen Plant Science Center, Department of Plant & Environmental Sciences, University of Copenhagen, Frederiksberg C, 1871, Denmark
contact email	staffan.persson@plen.ku.dk
lab head
Staffan Persson
contact affiliation	University of Copenhagen
contact email	staffan.persson@plen.ku.dk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD048346
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD048346

PRIDE project URI

Repository Record List

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