PXD048239 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Salt stress in freshwater anaerobic methane-oxidizing archaea |
| Description | Maider J. Echeveste Medrano and colleagues characterized the physiological and metabolic response of freshwater methanotrophic archaea to salt stress. The study performed metaproteomics, gene expression profiles and dedicated metabolomics to identify the pathways involved in the salt stress response and the osmolyte present in anaerobic methanotrophic archaea. Correspondence to Cornelia U. Welte c.welte@science.ru.nl |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-07-17 |
| AnnouncementXML | Submission_2024-07-17_14:16:58.256.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Martin Pabst |
| SpeciesList | scientific name: Candidatus Methanoperedens nitroreducens; NCBI TaxID: 1392998; |
| ModificationList | monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
| Instrument | Q Exactive HF |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2024-01-03 22:16:36 | ID requested | |
| ⏵ 1 | 2024-07-17 14:16:58 | announced | |
| 2 | 2024-10-22 06:50:44 | announced | 2024-10-22: Updated project metadata. |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: salt stress, methane-oxidizing archaea,Shotgun proteomics, metaproteomics |
Contact List
| Martin Pabst |
|---|
| contact affiliation | Department of Biotechnology, Delft University of Technology, The Netherlands. |
| contact email | m.pabst@tudelft.nl |
| lab head | |
| Martin Pabst |
|---|
| contact affiliation | TUD |
| contact email | m.pabst@tudelft.nl |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD048239 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD048239
- Label: PRIDE project
- Name: Salt stress in freshwater anaerobic methane-oxidizing archaea
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