PXD047932 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Palaeoproteomic analysis of a second hominin specimen from Baishiya Karst Cave, China |
| Description | An archaeological bone fragment from Baishiya Karst Cave, China, was identified as stemming from a hominin through ZooMS (Zooarchaeology by Mass Spectrometry). Shotgun palaeoproteomic analyses were thereafter conducted on the specimen to refine the taxonomic identification and perform phylogenetic analyses. The reconstruted proteome shows that the newly described Baishiya Karst Cave individual, Xiahe 2, is most closely related to the high-coverage published genome from a Denisovan individual. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-05-22 |
| AnnouncementXML | Submission_2024-05-22_01:38:30.490.xml |
| DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD047932 |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Zandra Fagernäs |
| SpeciesList | scientific name: Homo; NCBI TaxID: 9605; |
| ModificationList | hydroxylated proline; monohydroxylated residue; deamidated residue |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2023-12-19 02:28:03 | ID requested | |
| ⏵ 1 | 2024-05-22 01:38:30 | announced | |
| 2 | 2024-07-08 03:37:25 | announced | 2024-07-08: Updated project metadata. |
| 3 | 2024-10-22 06:40:53 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| submitter keyword: Skeletal proteome,Palaeoproteomics, Archaeology, Denisovan |
Contact List
| Frido Welker |
|---|
| contact affiliation | Globe Institute, University of Copenhagen, Denmark |
| contact email | frido.welker@sund.ku.dk |
| lab head | |
| Zandra Fagernäs |
|---|
| contact affiliation | Globe Institute, University of Copenhagen |
| contact email | zandra.fagernas@sund.ku.dk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD047932 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD047932
- Label: PRIDE project
- Name: Palaeoproteomic analysis of a second hominin specimen from Baishiya Karst Cave, China
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