PXD045825 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Analysis of peptides formed by an extended semisynthetic protease nanomachine |
Description | Within the cell, chemical reactions are often confined and organized through a modular architecture. In this project, a cell-free nanoscale model was analyzed that exploits this compartmentalization principle to perform regulated protein unfolding and degradation. To this end, protein degradation products resulting from degradation by the protease chymotrypsin, which was encapsulated in a DNA nanocompartment, were identified and quantified using an LFQ algorithm. |
HostingRepository | PRIDE |
AnnounceDate | 2024-07-25 |
AnnouncementXML | Submission_2024-07-25_09:35:05.063.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Farnusch Kaschani |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-09-29 11:15:59 | ID requested | |
⏵ 1 | 2024-07-25 09:35:05 | announced | |
Publication List
Keyword List
submitter keyword: Chymotrypsin, nanomachine,p97 |
Contact List
Farnusch Kaschani |
contact affiliation | Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany |
contact email | farnusch.kaschani@uni-due.de |
lab head | |
Farnusch Kaschani |
contact affiliation | University Duisburg-Essen |
contact email | farnusch.kaschani@uni-due.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD045825
- Label: PRIDE project
- Name: Analysis of peptides formed by an extended semisynthetic protease nanomachine