⮝ Full datasets listing

PXD045574-1

PXD045574 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleUnnatural lactam production by reprogrammed modular polyketide synthases in Pseudomonas putida
DescriptionIn recent years, type I polyketide synthases (PKSs) has emerged as an enticing platform for the production of novel molecules by reconstituting their modules, expanding the chemical landscape beyond the limitations of conventional metabolic engineering. This study reports a retrobiosynthesis approach to produce five-carbon lactam and its derivatives through the heterologous expression of reprogrammed PKS within Pseudomonas putida KT2440, a widely employed organism for the sustainable commodity chemical production. Combining with host optimization to prevent the catabolism of target product and engineering to facilitate the production of unique acyl-CoA extender units for PKS, this strategy enables mg · l−1 scale microbial production of unnatural lactams, even utilizing plant biomass hydrolysate as a starting material. The resulting novel nylons, derived from the polymerization of these unexplored monomers, hold promise for advancing textile materials, providing sustainable alternatives with potential across various industrial applications.
HostingRepositoryPRIDE
AnnounceDate2025-01-22
AnnouncementXMLSubmission_2025-01-22_13:25:48.854.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterChristopher Petzold
SpeciesList scientific name: Pseudomonas putida KT2440; NCBI TaxID: 160488;
ModificationListmonohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Exploris 480
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-09-21 16:36:58ID requested
12025-01-22 13:25:49announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Pseudomonas putida,Unatural lactam,Polyketide synthases
Contact List
Christopher J. Petzold
contact affiliationStaff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720
contact emailcjpetzold@lbl.gov
lab head
Christopher Petzold
contact affiliationLawrence Berkeley National Laboratory
contact emailcjpetzold@lbl.gov
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD045574
PRIDE project URI
Repository Record List
[ + ]