PXD044201 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Plasma Proteomic Characterization of Colorectal Cancer Patients with FOLFOX Chemotherapy |
| Description | Colorectal Cancer (CRC) is one of most common cancers in the world and a main treatment in postoperative chemotherapy is oxaliplatin and fluorouracil (FOLFOX), But the effect is different among CRC patients. In this study, LC-MS/MS strategy was used to profile the plasma proteome in FOLFOX benefit and futile group. As a result, a panel of plasma proteins by machine learning from our data was verified for a possible prediction tool in postdiagnosis. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_06:40:32.059.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Keren Zhang |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Exploris 240 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2023-07-29 21:17:14 | ID requested | |
| 1 | 2024-05-21 12:02:30 | announced | |
| ⏵ 2 | 2024-10-22 06:40:34 | announced | 2024-10-22: Updated project metadata. |
Publication List
| 10.1186/s12014-024-09454-z; |
| Wang X, Zhang K, He W, Zhang L, Gao B, Tian R, Xu R, Plasma proteomic characterization of colorectal cancer patients with FOLFOX chemotherapy by integrated proteomics technology. Clin Proteomics, 21(1):27(2024) [pubmed] |
Keyword List
| submitter keyword: Human Plasma Proteome |
| SISPROT |
| LC-MS/MS |
| Random Forest |
| PRM Validation |
Contact List
| Ruijun Tian |
|---|
| contact affiliation | Department of Chemistry, SUSTech |
| contact email | tianrj@sustech.edu.cn |
| lab head | |
| Keren Zhang |
|---|
| contact affiliation | SUSTech |
| contact email | zhangkr@mail.sustech.edu.cn |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD044201 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD044201
- Label: PRIDE project
- Name: Plasma Proteomic Characterization of Colorectal Cancer Patients with FOLFOX Chemotherapy
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