PXD042850-1

PXD042850 is an original dataset announced via ProteomeXchange.

Title	Dynamics of the blood plasma proteome during hyperacute HIV-1 infection
Description	Using DIA/SWATH mass spectrometry, we quantified over 1000 plasma protein profiles from 54 untreated matched individuals longitudinally before and during hAHI (defined as infection within one-month post-acquisition). By comparing the proteomic profiles two weeks and one month post infection with pre-infection levels, we characterised the longitudinal plasma protein expression profiles during hAHI, and determined proteins associated with ARS, viral control, and increased risk of clinical disease progression
HostingRepository	PRIDE
AnnounceDate	2024-11-01
AnnouncementXML	Submission_2024-11-01_08:34:41.260.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jamirah Nazziwa
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Human immunodeficiency virus 1; NCBI TaxID: NCBITaxon:11676;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2023-06-09 05:59:23	ID requested
⏵ 1	2024-11-01 08:34:41	announced

Dataset with its publication pending

submitter keyword: HIV-1, plasma, acute infection, DIA-SWATH

Joakim Esbjörnsson-Klemendz
contact affiliation	Associate Professor Systems Virology Department of Translation medicine Faculty of Medicine Lund University Sweden
contact email	joakim.esbjornsson@med.lu.se
lab head
Jamirah Nazziwa
contact affiliation	Department of Translational Medicine, Lund University
contact email	jamirah.nazziwa@med.lu.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/11/PXD042850

PRIDE project URI

• PRIDE
  1. PXD042850
     1. Label: PRIDE project
     2. Name: Dynamics of the blood plasma proteome during hyperacute HIV-1 infection