PXD042504
PXD042504 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | SARS-CoV-2 -1 PRF RNA Pull Down and SFL Pull Down |
Description | To identify the protein partners of SARS-CoV-2 -1 PRF RNA, we performed RNA pull-down assays using streptavidin magnetic beads. To obtain more accurate and reliable data, tRSA sequence-tagged -1 PRF and -1 FSE RNA probes were both used to capture binding proteins in our screen. As a random sequence control for nonspecificity, the equivalent proteins extracted from H1299 cells were incubated with tRSA-labeled -1 PRF and -1 FSE RNA probes. A high-throughput technology, LC/MS-MS(MS), was applied to identify the candidate interacting proteins of SARS-CoV-2 -1 PRF RNA. |
HostingRepository | iProX |
AnnounceDate | 2023-05-25 |
AnnouncementXML | Submission_2023-05-25_19:43:26.949.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Tanxiu Chen |
SpeciesList | scientific name: Homo sapiens; NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2023-05-25 19:43:05 | ID requested | |
⏵ 1 | 2023-05-25 19:43:27 | announced |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: SARS-CoV-2, -1 PRF RNA, SFL, mass spectrometry |
Contact List
Xiaozhong Peng | |
---|---|
contact affiliation | Chinese Academy of Medical Sciences, and Peking Union Medical College |
contact email | pengxiaozhong@pumc.edu.cn |
lab head | |
Tanxiu Chen | |
contact affiliation | Chinese Academy of Medical Sciences, and Peking Union Medical College |
contact email | chentanxiu@163.com |
dataset submitter |
Full Dataset Link List
iProX dataset URI |