PXD042482-1

PXD042482 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Fit for Purpose Approach to Evaluate Detection of Amino Acid Substitutions in Shotgun Proteomics
Description	Raw and processed data in support of manuscript, " Fit for Purpose Approach to Evaluate Detection of Amino Acid Substitutions in Shotgun Proteomics." Taylor J. Lundgren, Patricia L. Clark, Matthew M. Champion
HostingRepository	MassIVE
AnnounceDate	2023-08-09
AnnouncementXML	Submission_2023-08-09_09:14:31.026.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew
SpeciesList	scientific name: Escherichia coli; common name: E. coli; NCBI TaxID: 562; scientific name: Salmonella sp.; NCBI TaxID: 599;
ModificationList	Deamidated; Carbamidomethyl; Oxidation; Glu->pyro-Glu; Gln->pyro-Glu
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-05-24 12:07:02	ID requested
⏵ 1	2023-08-09 09:14:31	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: amino acid variants, substitutions, ms-fragger, control dataset, mixed proteome

submitter keyword: amino acid variants, substitutions, ms-fragger, control dataset, mixed proteome

Contact List

Matthew Champion
contact affiliation	University of Notre Dame
contact email	mchampio@nd.edu
lab head
Matthew
contact affiliation	University of Notre Dame
contact email	mchampio@nd.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000092029/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000092029/