PXD041951 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Flavodoxin Landscape in Clostridioides difficile |
Description | C. difficile infections have become a major challenge in medical facilities today. The bacterium is capable of spore formation, which even allows survival of antibiotic treatment. Therefore, research on the physiology of C. difficile is important for the development of alternative treatment strategies. In this study, we investigated eight putative flavodoxins of C. difficile 630. Flavodoxins are small electron transfer proteins of specifically low potential. The unusually high number of flavodoxins in C. difficile compared to other bacteria suggests that they are expressed under different conditions. Therefore, we investigated expression along bacterial growth and found high transcription levels during the exponential growth phase, especially for floX. Since flavodoxins in other bacteria are capable of replacing ferredoxins with their [2Fe-2S] clusters under iron deficiency conditions, we also examined flavodoxin expression in C. difficile under low iron and no iron levels. |
HostingRepository | PRIDE |
AnnounceDate | 2024-02-02 |
AnnouncementXML | Submission_2024-02-02_00:53:56.669.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Daniela Zuehlke |
SpeciesList | scientific name: Peptoclostridium difficile (strain 630) (Clostridium difficile); NCBI TaxID: 272563; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-05-03 09:15:44 | ID requested | |
⏵ 1 | 2024-02-02 00:53:57 | announced | |
2 | 2024-10-22 06:28:23 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: expression profiling,mass spectrometry, parallel reaction monitoring |
Contact List
Susanne Sievers |
contact affiliation | University of Greifswald, Institute of Microbiology |
contact email | susanne.sievers@uni-greifswald.de |
lab head | |
Daniela Zuehlke |
contact affiliation | University of Greifswald, Institute of Microbiology |
contact email | zuehlke@uni-greifswald.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD041951
- Label: PRIDE project
- Name: Flavodoxin Landscape in Clostridioides difficile