PXD041922 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | The effect of epinephrine on immature and mature planktonic cultures and biofilms of a commensal actinobacterium Micrococcus luteus C01 |
| Description | The importance of the impact of human hormones on commensal microbiota and microbial biofilms is established in lots of studies. In the present investigation, we studied the proteome of the biofilm matrix of the commensal actinobacterium Micrococcus luteus C01. In our investigation, we tested the effect of epinephrine in concentration 4.9×10-9 M on immature (24 h ) and mature (72 h) planktonic cultures and biofilms in comparison with controls without the hormone administration. Also, we investigated the temporal changes in the total proteome during the incubation in control samples and in samples with epinephrine. The present database contains the raw data of proteins changes in their concentrations in described conditions. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_06:10:04.260.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Rustam Ziganshin |
| SpeciesList | scientific name: Micrococcus luteus (Micrococcus lysodeikticus); NCBI TaxID: 1270; |
| ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2023-05-02 00:40:24 | ID requested | |
| 1 | 2023-10-24 12:48:32 | announced | |
| 2 | 2023-11-14 09:10:39 | announced | 2023-11-14: Updated project metadata. |
| ⏵ 3 | 2024-10-22 06:10:05 | announced | 2024-10-22: Updated project metadata. |
Publication List
| 10.3390/microorganisms11092181; |
| Gannesen AV, Ziganshin RH, Ovcharova MA, Nevolina ED, Klimko AI, Martyanov SV, Plakunov VK, Skin Strain C01: Revelation of the Conditionally Extensive Hormone Effect Using Orbitrap Mass Spectrometry and Proteomic Analysis. Microorganisms, 11(9):(2023) [pubmed] |
Keyword List
| submitter keyword: LC-MS,Micrococcus luteus, epinephrine, proteome |
Contact List
| Yury A. Nikolayev |
|---|
| contact affiliation | Laboratory of viability of microorganisms, Federal research center “Fundamentals of biotechnology” of Russian Academy of sciences, Moscow, Russia |
| contact email | nikolaevya@mail.ru |
| lab head | |
| Rustam Ziganshin |
|---|
| contact affiliation | Shemyakin-Ovchinnikov Institute of bioorganic chemistry Russian Academy of Sciences |
| contact email | rustam.ziganshin@gmail.com |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
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| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD041922
- Label: PRIDE project
- Name: The effect of epinephrine on immature and mature planktonic cultures and biofilms of a commensal actinobacterium Micrococcus luteus C01
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