PXD041794-1

PXD041794 is an original dataset announced via ProteomeXchange.

Title	A Bioconductor workflow for processing, evaluating and interpreting expression proteomics data: Case data
Description	Files associated with "A Bioconductor workflow for processing, evaluating and interpreting expression proteomics data".
HostingRepository	PRIDE
AnnounceDate	2023-06-29
AnnouncementXML	Submission_2023-06-29_09:47:52.577.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	CharlotteHutchings
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; deaminated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2023-04-25 02:27:24	ID requested
⏵ 1	2023-06-29 09:47:52	announced

Dataset with its publication pending

submitter keyword: LFQ, Differential Expression,TMT, Shotgun Proteomics

KathrynLilley
contact affiliation	Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge
contact email	ksl23@cam.ac.uk
lab head
CharlotteHutchings
contact affiliation	University of Cambridge
contact email	ch941@cam.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/06/PXD041794

PRIDE project URI

• PRIDE
  1. PXD041794
     1. Label: PRIDE project
     2. Name: A Bioconductor workflow for processing, evaluating and interpreting expression proteomics data: Case data