PXD041131-1

PXD041131 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Characterization of the proteome of E. coli and P. aeruginosa from exponential into deep stationary phase
Description	The goal of this experiment was to assess changes in the proteome of E. coli MG1655 and P. aeruginosa PAO1 as they go deeper into stationary phase and become more dormant. In this project we grew cultures of these model organisms in glucose-based minimal medium at 37 degree and sampled aliquots to determine their proteome at various growth phases, including 3, 12, 24, and 48 hours after after 1:100 dilution from dense overnight cultures. Biological triplicates of culture aliquots were snap-frozen, and whole-proteome extraction followed by MS/MS detection of peptides was performed.
HostingRepository	MassIVE
AnnounceDate	2023-10-30
AnnouncementXML	Submission_2023-10-30_02:10:57.293.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alex Schmidt
SpeciesList	scientific name: Escherichia coli; common name: E. coli; NCBI TaxID: 562; scientific name: Pseudomonas aeruginosa; NCBI TaxID: 287;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-03-27 07:10:16	ID requested
⏵ 1	2023-10-30 02:10:57	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: ECOLI, PAeruginosa, LC-MS

submitter keyword: ECOLI, PAeruginosa, LC-MS

Contact List

Alexander Schmidt
contact affiliation	Biozentrum, Universtiy of Basel, 4056 Basel, Switzerland
contact email	alex.schmidt@unibas.ch
lab head
Alexander Hams
contact affiliation	ETH Zurich Dep. of Health Sciences and Technology
contact email	alexander.harms@hest.ethz.ch
lab head
Alex Schmidt
contact affiliation	University of Basel
contact email	alex.schmidt@unibas.ch
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000091557/