PXD040352 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Functional characterisation of nematode spliced leader 1 trans-splicing factors SUT-1, SNA-2, SNA-3 and SNR-2 by immunoprecipitation and LC-MS/MS. |
Description | Spliced leader trans-splicing is an essential RNA processing step that is required for the formation of mRNA in many eukaryotes, including C. elegans. However, the role of factors involved in this reaction is not well known. Here we further characterise the function of SNA-2, SNA-3, SUT-1 and SNR-2 involved in spliced leader 1 trans-splicing through identification of interacting proteins by immunoprecipitation followed by LC-MS/MS and label-free quantification. |
HostingRepository | PRIDE |
AnnounceDate | 2024-04-23 |
AnnouncementXML | Submission_2024-04-23_07:49:21.990.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Berndt Muller |
SpeciesList | scientific name: Caenorhabditis elegans; NCBI TaxID: 6239; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-02-23 03:50:03 | ID requested | |
⏵ 1 | 2024-04-23 07:49:22 | announced | |
Publication List
Keyword List
submitter keyword: small nuclear ribonucleoproteins,RNA processing, Caenorhabditis elegans |
Contact List
Berndt Muller |
contact affiliation | University of Aberdeen School of Medicine, Medical Sciences and Nutrition Institute of Medical Sciences, Foresterhill Aberdeen AB25 2ZD Scotland, United Kingdom |
contact email | b.mueller@abdn.ac.uk |
lab head | |
Berndt Muller |
contact affiliation | University of Aberdeen |
contact email | b.mueller@abdn.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD040352
- Label: PRIDE project
- Name: Functional characterisation of nematode spliced leader 1 trans-splicing factors SUT-1, SNA-2, SNA-3 and SNR-2 by immunoprecipitation and LC-MS/MS.