PXD040157-2

PXD040157 is an original dataset announced via ProteomeXchange.

Title	Pulldown with DNA mimicking foldamers in preblastoderm Drosophila embryo extract
Description	16mer and 32mer biotinylated DNA mimics (“foldamers”) bound to streptavidin beads, AP-MS after 1h incubation in Drosophila preblastoderm embryo extract.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:05:04.164.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Axel Imhof
SpeciesList	scientific name: Drosophila melanogaster (Fruit fly); NCBI TaxID: 7227;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-16 09:45:34	ID requested
1	2023-09-07 06:40:24	announced
⏵ 2	2023-11-14 09:05:08	announced	2023-11-14: Updated project metadata.
3	2024-10-22 06:02:51	announced	2024-10-22: Updated project metadata.

Kleene V, Corvaglia V, Chacin E, Forne I, Konrad DB, Khosravani P, Douat C, Kurat CF, Huc I, Imhof A, DNA mimic foldamers affect chromatin composition and disturb cell cycle progression. Nucleic Acids Res, 51(18):9629-9642(2023) [pubmed]

submitter keyword: DNA mimcs, LC-MS, Exploris 480, in vitro chromatin assembly,Drosophila embryo extract (DREX)

Axel Imhof
contact affiliation	Department of Molecular Biology, Biomedical Center Munich, Ludwig-Maximilians University, Großhaderner Strasse 9, 82152 Planegg-Martinsried, Germany
contact email	imhof@lmu.de
lab head
Axel Imhof
contact affiliation	BioMedical Center
contact email	imhof@lmu.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD040157

PRIDE project URI

• PRIDE
  1. PXD040157
     1. Label: PRIDE project
     2. Name: Pulldown with DNA mimicking foldamers in preblastoderm Drosophila embryo extract