PXD039927-2

PXD039927 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Composition of the mitoribosome of Diplonema papillatum
Description	Biosynthesis of mitochondrial genome-encoded proteins is carried out by the mitoribosome, a specialized apparatus that has evolved and diverged dramatically since its bacterial origin. Recent studies across various eukaryotes have demonstrated widespread structural and compositional diversity of mitoribosomes. We used affinity pulldown of four mitoribosomal proteins to carry out a detailed analysis of mitoribosomes in Diplonema papillatum, the type species of diplonemids, a widespread group of single-celled marine flagellates. Using as baits mitoribosomal proteins integrating at distinct sites and phases during subunit maturation also allowed us to sample populations of mitoribosome assembly intermediates.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:00:19.083.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matus Valach
SpeciesList	scientific name: Diplonema papillatum; NCBI TaxID: 91374;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-07 14:07:19	ID requested
1	2023-05-19 09:25:20	announced
⏵ 2	2023-11-14 09:00:19	announced	2023-11-14: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Diplonema papillatum, protist, mitoribosome, assembly intermediate, immunoprecipitation,LC-MSMS

submitter keyword: Diplonema papillatum, protist, mitoribosome, assembly intermediate, immunoprecipitation,LC-MSMS

Contact List

Gertraud Burger
contact affiliation	Université de Montréal, Quebec, Canada
contact email	gertraud.burger@umontreal.ca
lab head
Matus Valach
contact affiliation	Université de Montréal
contact email	matus.a.valach@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD039927
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD039927

PRIDE project URI

Repository Record List

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