⮝ Full datasets listing
PXD039880-2
PXD039880 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Discovery and characterization of a chemical probe targeting the zinc-finger ubiquitin-binding domain of HDAC6 |
| Description | Cellular selectivity of a chemical probe for the UBD of HDAC6. A biotinylated analog of HDAC6 chemical probe SGC-UBD253 bound to streptavidin beads was used to enrich HDAC6 from cytoplasmic fraction of HEK293 lysate. A triplicate of each condition - competition with probe, control, DMSO - was done. |
| HostingRepository | PRIDE |
| AnnounceDate | 2023-11-14 |
| AnnouncementXML | Submission_2023-11-14_09:07:53.738.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Suzanne Ackloo |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2023-02-06 02:59:21 | ID requested | |
| 1 | 2023-10-24 11:46:00 | announced | |
| ⏵ 2 | 2023-11-14 09:07:55 | announced | 2023-11-14: Updated project metadata. |
Publication List
Keyword List
| submitter keyword: ubiquitin binding domain, chemical probe, UBD, chemoproteomics,HDAC6 |
Contact List
| Cheryl H Arrowsmith | |
|---|---|
| contact affiliation | CSO, Structural Genomics Consortium Professor, Medical Biophysics, University of Toronto Sr. Scientist, Princess Margaret Cancer Centre |
| contact email | Cheryl.Arrowsmith@uhnresearch.ca |
| lab head | |
| Suzanne Ackloo | |
| contact affiliation | University of Toronto |
| contact email | suzanne.ackloo@utoronto.ca |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD039880 |
| PRIDE project URI |
Repository Record List
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