PXD039878-1

PXD039878 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	KINETIC AND COMPOSITIONAL ANALYSIS OF RNA POLYMERASE II IN TRYPANOSOMA BRUCEI
Description	Genome-wide analysis of nascent RNA synthesis gives kinetic information on the transcriptional status of RNA polymerase II (Pol II). In parallel, immunoprecipitation of the largest subunit of Pol II (RPB1) provides the protein composition of the enzyme complex in the presence or absence of the transcriptional inhibitor Actinomycin D.
HostingRepository	PRIDE
AnnounceDate	2023-05-23
AnnouncementXML	Submission_2023-05-23_00:37:27.470.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	ManfredHeller
SpeciesList	scientific name: Trypanosoma brucei; NCBI TaxID: 5691;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-02-06 02:58:40	ID requested
⏵ 1	2023-05-23 00:37:27	announced
2	2023-11-14 09:00:23	announced	2023-11-14: Updated project metadata.

Publication List

Keyword List

submitter keyword: RNA polymerase II
transcription
RNA export
nuclear pore

submitter keyword: RNA polymerase II

transcription

RNA export

nuclear pore

Contact List

IsabelRoditi
contact affiliation	Institute of Cell Biology University of Berne Baltzerstrasse 4 CH-3012 Berne, Switzerland
contact email	isabel.roditi@unibe.ch
lab head
ManfredHeller
contact affiliation	Proteomics and Mass Spectrometry Core Facility, Department for BioMedical Research (DBMR), University of Bern, Bern, Switzerland
contact email	pmscf@dbmr.unibe.ch
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD039878
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD039878

PRIDE project URI

Repository Record List

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