PXD039580 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Benchmarking of DDA and plexDIA analysis with SILAC-labelled Hela cell samples |
Description | SILAC labelled Hela cell lysates were mixed in defined ratios and analysed using both DDA and DIA methods, to serve as a benchmark for the novel plexDIA features of DIA-NN. |
HostingRepository | PRIDE |
AnnounceDate | 2023-10-19 |
AnnouncementXML | Submission_2023-10-19_02:46:47.716.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD039580 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | TomanBortecen |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; deaminated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-01-20 02:39:39 | ID requested | |
⏵ 1 | 2023-10-19 02:46:48 | announced | |
Publication List
Keyword List
submitter keyword: Hela,SILAC, DDA |
Contact List
JeroenKrijgsveld |
contact affiliation | German Cancer Research Center (DKFZ) Heidelberg University Clinic |
contact email | j.krijgsveld@dkfz-heidelberg.de |
lab head | |
TomanBortecen |
contact affiliation | German Cancer Research Center (DKFZ) |
contact email | toman@hotmail.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD039580 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD039580
- Label: PRIDE project
- Name: Benchmarking of DDA and plexDIA analysis with SILAC-labelled Hela cell samples