PXD039125-1

PXD039125 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	PerTurboID of Plasmofium falciparum cytoadhesion complex
Description	In this project proximity labeling was used to first identify proteins in the close vicinity of the P. falciparum exported kinase FIKK4.1 by fusing it to a biotin ligase. A conditional KO of the exported kinase FIKK4.1 was then generated for two identified targets, PTP4 and Kahrp in a FIKK4.1 conditional KO line. We then measured the proximity proteome of KAHRP and PTPT4 in the presence, and absence of FIKK4.1.
HostingRepository	PRIDE
AnnounceDate	2023-09-21
AnnouncementXML	Submission_2023-09-21_09:08:55.768.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	MoritzTreeck
SpeciesList	scientific name: Plasmodium falciparum NF54; NCBI TaxID: 5843; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	biotinylated residue; phosphorylated residue; acetylated residue; monohydroxylated residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-01-02 01:13:43	ID requested
⏵ 1	2023-09-21 09:08:56	announced
2	2023-11-14 07:19:27	announced	2023-11-14: Updated project metadata.
3	2024-10-22 06:03:32	announced	2024-10-22: Updated project metadata.

Publication List

Keyword List

submitter keyword: Malaria Plasmodium falciparum red blood cells LC-MS/MS

submitter keyword: Malaria Plasmodium falciparum red blood cells LC-MS/MS

Contact List

MoritzTreeck
contact affiliation	The Francis Crick Institute
contact email	motreeck@gmail.com
lab head
MoritzTreeck
contact affiliation	The Francis Crick Institute
contact email	motreeck@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD039125
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD039125

PRIDE project URI

Repository Record List

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