PXD038653-2

PXD038653 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Posttranslation modification of NF-kB inducing kinase
Description	2 This project is to identify the potential neddylation sites in human NF-kB inducing kinase (A.k.a. Map3K14). NIK-HA or NIK-HA in combination with FLAG-NEDD8 were co-expressed in HEK293T cells. NIK-HA were pulled down via denaturing immunoprecipitation protocol, subject to SDS-PAGE, in-gel trypsin digestion, and Nano LC-MS/MS Analysis. The potential peptides containing K-GG sites were identified.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:26:17.814.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Weiqin Chen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-12-07 12:01:21	ID requested
1	2023-03-10 10:44:18	announced
⏵ 2	2023-11-14 08:26:21	announced	2023-11-14: Updated project metadata.

Publication List

Xu C, Zhou H, Jin Y, Sahay K, Robicsek A, Liu Y, Dong K, Zhou J, Barrett A, Su H, Chen W, B-inducing kinase in mice. Nat Commun, 13(1):7782(2022) [pubmed]

Xu C, Zhou H, Jin Y, Sahay K, Robicsek A, Liu Y, Dong K, Zhou J, Barrett A, Su H, Chen W, B-inducing kinase in mice. Nat Commun, 13(1):7782(2022) [pubmed]

Keyword List

submitter keyword: Human, NIK

submitter keyword: Human, NIK

Contact List

Weiqin Chen
contact affiliation	Department of Physiology, Medical College of Georgia, Augusta University
contact email	wechen@augusta.edu
lab head
Weiqin Chen
contact affiliation	Augusta University
contact email	wechen@augusta.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD038653
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD038653

PRIDE project URI

Repository Record List

[ + ]