PXD038372-1

PXD038372 is an original dataset announced via ProteomeXchange.

Title	Proteome of SUDIPG, SF7761 and primary non diseased brain samples
Description	DIPG is a paediatric brainstem glioma with no cure. Cellular immunotherapy approaches require specific targeting of unique and tumour specific cell surface antigens, however, there is a paucity of known targets for DIPG. In this study we have used a proteomics approach to interrogate an array of patient derived DIPG cell lines to identify potential immunotherapy targets
HostingRepository	PRIDE
AnnounceDate	2023-10-24
AnnouncementXML	Submission_2023-10-24_12:34:07.716.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	KirtiPandey
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	maXis

Revision	Datetime	Status	ChangeLog Entry
0	2022-11-26 01:47:49	ID requested
⏵ 1	2023-10-24 12:34:08	announced
2	2023-11-14 09:09:44	announced	2023-11-14: Updated project metadata.
3	2024-10-22 06:09:56	announced	2024-10-22: Updated project metadata.

Pandey K, Wang SS, Mifsud NA, Faridi P, Davenport AJ, Webb AI, Sandow JJ, Ayala R, Monje M, Cross RS, Ramarathinam SH, Jenkins MR, Purcell AW, A combined immunopeptidomics, proteomics, and cell surface proteomics approach to identify immunotherapy targets for diffuse intrinsic pontine glioma. Front Oncol, 13():1192448(2023) [pubmed]

submitter keyword: brain, Bruker,DIPG, Proteomics, S-TRAP, DDA

Anthony WaynePurcell
contact affiliation	Department of Biochemistry and Molecular Biology and Infection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton 3800, VIC, Australia
contact email	anthony.purcell@monash.edu
lab head
KirtiPandey
contact affiliation	Monash University
contact email	kirti.pandey@monash.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD038372

PRIDE project URI

• PRIDE
  1. PXD038372
     1. Label: PRIDE project
     2. Name: Proteome of SUDIPG, SF7761 and primary non diseased brain samples