PXD037850-2

PXD037850 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of gut tissue of Labeo rohita infected with Aeromonas hydrophila
Description	This study aimed at performing the quantitative proteomics analysis of gut tissue, one of Labeo rohita, one of the important aquaculture fish species. Data was acquired using high resolution mass spectrometry followed by Label free quantification. After performing statistical analysis, a panel of differentially expressed proteins were identified which include extracellular matrix proteins, cytoskeletal proteins, immune related proteins and metabolic enzymes. This analysis revealed important signaling pathways and protein-protein interaction networks which could help in understanding disease pathogenesis. The data acquired in the study would provide a basis for further omics research and can help in elucidating biological processes in healthy or diseased fish.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:56:48.001.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mehar Un Nissa
SpeciesList	scientific name: Labeo rohita (Indian major carp); NCBI TaxID: 84645;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-31 09:10:09	ID requested
1	2024-08-27 20:15:34	announced
⏵ 2	2024-10-22 06:56:48	announced	2024-10-22: Updated project metadata.

10.1128/MSYSTEMS.00247-24;

submitter keyword: SRM, rohu, mass spectrometry,Aeromonas hydrophila, bacterial infection, gut proteomics

Sanjeeva Srivastava
contact affiliation	Department of Biosciences and Bioengineering, IIT Bombay, India
contact email	sanjeeva@iitb.ac.in
lab head
Mehar Un Nissa
contact affiliation	Indian Institute of Technology Bombay
contact email	kohlimeharunnissa@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD037850

PRIDE project URI

• PRIDE
  1. PXD037850
     1. Label: PRIDE project
     2. Name: Proteomic analysis of gut tissue of Labeo rohita infected with Aeromonas hydrophila