PXD037725 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomic analysis of the role of RALF34 small signaling peptides in the regulation of cucumber (Cucumis sativus) root development |
Description | To elucidate the functional role of the small signaling peptide RALF34 in the parental root meristem and its role in lateral root initiation, we studied changes in Cucumis sativus proteome during CsRALF34 gene overexpression. Composite plants with transgenic root systems carrying the construct for CsRALF34 overexpression (p35S::CsRALF34-TermAct) and control roots carrying p35S-GUS-TermAct were obtained and their proteome profiles were compared. |
HostingRepository | PRIDE |
AnnounceDate | 2023-05-10 |
AnnouncementXML | Submission_2023-05-10_13:43:42.792.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD037725 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | EgorRepkin |
SpeciesList | scientific name: Cucumis sativus; NCBI TaxID: 3659; |
ModificationList | acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
Instrument | timsTOF Pro 2 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-10-26 01:00:37 | ID requested | |
⏵ 1 | 2023-05-10 13:43:43 | announced | |
2 | 2023-11-14 08:47:00 | announced | 2023-11-14: Updated project metadata. |
Publication List
10.6019/PXD037725; |
Shumilina J, Kiryushkin AS, Frolova N, Mashkina V, Ilina EL, Puchkova VA, Danko K, Silinskaya S, Serebryakov EB, Soboleva A, Bilova T, Orlova A, Guseva ED, Repkin E, Pawlowski K, Frolov A, Demchenko KN, Integrative Proteomics and Metabolomics Analysis Reveals the Role of Small Signaling Peptide Rapid Alkalinization Factor 34 (RALF34) in Cucumber Roots. Int J Mol Sci, 24(8):(2023) [pubmed] |
Keyword List
submitter keyword: lateral root initiation, CsRALF34, RALF34,Cucumber, proteome, Cucumis sativus |
Contact List
AndrejFrolov |
contact affiliation | Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, 06120 Halle (Saale), Germany |
contact email | Andrej.Frolov@ipb-halle.de |
lab head | |
EgorRepkin |
contact affiliation | Saint-Petersburg State University |
contact email | erepkin53@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037725
- Label: PRIDE project
- Name: Proteomic analysis of the role of RALF34 small signaling peptides in the regulation of cucumber (Cucumis sativus) root development