PXD037358 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Comparative quantitative proteomic analysis of Arabidopsis thylakoid membranes from plants grown under low, moderate and high illumination. Effects of stn7 and tap38 mutations. |
Description | Plants grown under different illumination levels undergo a long-term acclimation response (LTR) resulting in differences in their leaf morphology and chloroplast protein composition to maximise their growth. At the proteomic level, LTR involves modulating the stoichiometry of photosynthetic complexes within the thylakoid membrane through de novo synthesis and degradation of specific proteins. The signalling pathways that mediate LTR in relation to light intensity remain largely unknown, however earlier studies demonstrated a key role for the light-harvesting complex II (LHCII) serine-threonine kinase STN7. We explored the effects of mutant strains of Arabidopsis targeting STN7 and its cognate phosphatase TAP38 in the LTR to low, moderate and high illumination, employing label-free quantitative proteomic analysis. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:59:05.367.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Philip Jackson |
SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-10-13 05:52:05 | ID requested | |
⏵ 1 | 2023-11-14 08:59:05 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Arabidopsis thaliana, TAP38, STN7, Light harvesting complex, Photosystem, Thylakoid, Electron transfer., Light acclimation |
Contact List
Matt Johnson |
contact affiliation | School of Biosciences, University of Sheffield, UK |
contact email | matt.johnson@sheffield.ac.uk |
lab head | |
Philip Jackson |
contact affiliation | School of Biosciences, University of Sheffield |
contact email | p.j.jackson@sheffield.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037358
- Label: PRIDE project
- Name: Comparative quantitative proteomic analysis of Arabidopsis thylakoid membranes from plants grown under low, moderate and high illumination. Effects of stn7 and tap38 mutations.