PXD037126-1

PXD037126 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation
Description	We performed proteomics on naturally infested green ash (F. pennsylvanica) trees at low and high levels of emerald ash borer (A. planipennis) infestation. Our integrative analysis of the RNA-Seq and proteomics data identified 14 proteins and 4 transcripts that contribute most to the difference between highly infested and low infested trees.
HostingRepository	MassIVE
AnnounceDate	2023-03-29
AnnouncementXML	Submission_2023-03-29_06:58:36.460.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christine Chiu
SpeciesList	scientific name: Fraxinus pennsylvanica; common name: green ash; NCBI TaxID: 56036;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion ETD

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-09-30 12:27:41	ID requested
⏵ 1	2023-03-29 06:58:36	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: emerald ash borer, Fraxinus, plant defense, transcriptomics, proteomics

submitter keyword: emerald ash borer, Fraxinus, plant defense, transcriptomics, proteomics

Contact List

Armand Seguin
contact affiliation	Laurentian Forestry Centre
contact email	armand.seguin@NRCan-RNCan.gc.ca
lab head
Christine Chiu
contact affiliation	Laurentian Forestry Centre
contact email	chchi31@ulaval.ca
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000090439/