PXD036886 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | semi-automated enrichment of AHA-containing newly-synthesized proteins with magnetic alkyne agarose beads |
Description | Development of an improved workflow for newly synthesized proteome analysis, based on combined pulsed metabolic labelling with L-azidohomoalanine (AHA) and semi-automated click chemistry-based enrichments with magnetic alkyne agarose beads. |
HostingRepository | PRIDE |
AnnounceDate | 2023-10-19 |
AnnouncementXML | Submission_2023-10-19_01:29:33.030.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD036886 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | TomanBortecen |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-09-21 01:06:26 | ID requested | |
⏵ 1 | 2023-10-19 01:29:33 | announced | |
Publication List
Keyword List
submitter keyword: automation, SILAC, click chemistry, nascent proteome |
Contact List
Prof. JeroenKrijgsveld |
contact affiliation | German Cancer Research Center (DKFZ) University Clinic Heidelberg |
contact email | j.krijgsveld@dkfz-heidelberg.de |
lab head | |
TomanBortecen |
contact affiliation | German Cancer Research Center (DKFZ) |
contact email | toman@hotmail.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD036886 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD036886
- Label: PRIDE project
- Name: semi-automated enrichment of AHA-containing newly-synthesized proteins with magnetic alkyne agarose beads