PXD033208-1

PXD033208 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Human HEK293T and Pig cardiac top-down proteomes from Bruker maXis II
Description	These data, derived from PXD019368 (PMID 33231430) and PXD010825 (PMID 30988469) represent a test of deconvolution algorithms for top-down proteomics experiments on the Bruker maXis II Q-TOF. Three LC-MS/MS experiments are available from pig cardiac tissue in both raw .d directories and in deconvolved msAlign files produced by Bruker DataAnalysis 5.3, TopFD 1.4.13, FLASHDeconv 2.0, and Mascot Distiller 2.8. Eight LC-MS/MS experiments are available from human HEK293T cell lysates, with four produced using Triton and four produced using Tergitol. The inferred precursor charges, precursor masses, and numbers of tandem mass spectra diverge considerably depending upon deconvolution algorithm.
HostingRepository	MassIVE
AnnounceDate	2022-04-13
AnnouncementXML	Submission_2022-04-13_10:33:24.937.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	David L. Tabb
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; scientific name: Sus scrofa; common name: pig; NCBI TaxID: 9823;
ModificationList	Oxidation; Acetyl
Instrument	maXis II

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-04-13 09:43:43	ID requested
⏵ 1	2022-04-13 10:33:25	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: top-down, Q-TOF, deconvolution

submitter keyword: top-down, Q-TOF, deconvolution

Contact List

Ying Ge
contact affiliation	University of Wisconsin-Madison
contact email	ge2@wisc.edu
lab head
David L. Tabb
contact affiliation	Stellenbosch University
contact email	dtabb@sun.ac.za
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089252/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089252/