PXD031000 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomes of the cold-adapted Baikal region amphipods exposed to heat shock |
Description | The proteomes of three amphipod species, a Holarctic species Gammarus lacustris and two Biakal species Eulimnogammarus verrucosus and Eulimnogammarus cyaneus, were received by LC-MS/MS with TMT-labeling. All animals were collected in August 2018. Before the exposition, animals were acclimated in 6C for 25 days. Three species of amphipods were exposed to heat stress (24.6 C for 24 h) and control temperature (6C for 24 h). |
HostingRepository | PRIDE |
AnnounceDate | 2024-02-15 |
AnnouncementXML | Submission_2024-02-15_10:22:22.848.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD031000 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Polina Lipaeva |
SpeciesList | scientific name: Gammarus lacustris; NCBI TaxID: 52639; scientific name: Eulimnogammarus cyaneus; NCBI TaxID: 52945; scientific name: Eulimnogammarus verrucosus; NCBI TaxID: 36941; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-01-16 14:01:47 | ID requested | |
⏵ 1 | 2024-02-15 10:22:23 | announced | |
Publication List
10.6019/PXD031000; |
Lipaeva P, Karkossa I, Bedulina D, Schubert K, Luckenbach T, Cold-adapted amphipod species upon heat stress: Proteomic responses and their correlation with transcriptomic responses. Comp Biochem Physiol Part D Genomics Proteomics, 45():101048(2023) [pubmed] |
10.1016/j.cbd.2022.101048; |
Keyword List
submitter keyword: LC-MSMS, heat shock, TMT-labeling,amphipods |
Contact List
Till Luckenbach |
contact affiliation | Department of Bioanalytical Ecotoxicology, Helmholtz Centre for Environmental Research—UFZ, Leipzig, Germany |
contact email | till.luckenbach@ufz.de |
lab head | |
Polina Lipaeva |
contact affiliation | Department of Endocrinology and Diabetology, Medical Faculty and University Hospital, Heinrich-Heine-University, Düsseldorf, Germany |
contact email | polina.lipaeva@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD031000
- Label: PRIDE project
- Name: Proteomes of the cold-adapted Baikal region amphipods exposed to heat shock