PXD029818-1

PXD029818 is an original dataset announced via ProteomeXchange.

Title	Proteomic profiling of rabbit eyes
Description	Rabbits have been widely used for studying ocular physiology and pathology due to their relatively large eye size and similar structures with human eyes. Various rabbit ocular disease models, such as dry eye, age-related macular degeneration, and glaucoma, have been established. Despite the growing application of proteomics in vision research using rabbit ocular models, there is no spectral assay library for rabbit eye proteome publicly available. Here, we generated spectral assay libraries for rabbit eye compartments, including conjunctiva, cornea, iris, retina, sclera, vitreous humor, and tears using fractionated samples and ion mobility separation enabling deep proteome coverage. The rabbit eye spectral assay library includes 9,153 protein groups, and 107,898 peptides. We present the data as a freely available community resource for proteomic studies in the vision field.
HostingRepository	PRIDE
AnnounceDate	2021-11-24
AnnouncementXML	Submission_2021-11-24_10:30:05.170.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Guoting Qin
SpeciesList	scientific name: Oryctolagus cuniculus; NCBI TaxID: 9986;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	timsTOF Pro

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-20 07:54:44	ID requested
⏵ 1	2021-11-24 10:30:05	announced

Dataset with its publication pending

submitter keyword: Rabbit, eye, proteome, mass spectrometry

Guoting Qin
contact affiliation	University of Houston, Houston, TX 77204
contact email	gqin@central.uh.edu
lab head
Guoting Qin
contact affiliation	University of Houston
contact email	gqin@central.uh.edu
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD029818
     1. Label: PRIDE project
     2. Name: Proteomic profiling of rabbit eyes