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PXD029377-1

PXD029377 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleIntracellular and extracellular proteome characterization of virulent and avirulent Bursaphelenchus xylophilus isolates
DescriptionThe pinewood nematode (PWN), Bursaphelenchus xylophilu (Bx) s, one of the most serious forest pests, worldwide, is considered the causal agent of the pine wilt disease (PWD). The main host species belong to the genus Pinus and a variation in the susceptibility of several pine species to PWN infection is well-known. Additionally, it is also recognized that there is variation in the virulence among different B. xylophilus isolates. In the present study, we applied a quantitative mass spectrometry-based proteomics approach to perform a deep characterization of proteomic changes across two B. xylophilus isolates from different hosts and geographical origins and with different virulence. A total of 1456 proteins were quantified and compared between the two isolates secretomes and a total of 2741 proteins were quantified and compared between the nematode proteomes in two different conditions, pine tree extract and fungus stimuli.
HostingRepositoryPRIDE
AnnounceDate2022-01-13
AnnouncementXMLSubmission_2022-01-13_02:32:41.891.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterSandra Anjo
SpeciesList scientific name: Bursaphelenchus xylophilus; NCBI TaxID: 6326;
ModificationListS-carboxamidoethyl-L-cysteine
InstrumentTripleTOF 6600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-10-27 08:13:08ID requested
12022-01-13 02:32:42announced
22023-05-26 06:20:29announced2023-05-26: Updated project metadata.
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Intracellular proteome
extracellular proteome
Bursaphelenchus xylophilus, pinewood nematode, avirulent isolate, virulent isolate, proteomics
Contact List
Joana Sá
contact affiliationCentre for Functional Ecology, University of Coimbra
contact emailjoana.cardoso@uc.pt
lab head
Sandra Anjo
contact affiliation​Center for Neuroscience and Cell Biology – University of Coimbra
contact emailsandra.isabel.anjo@gmail.com
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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