PXD028426-1

PXD028426 is an original dataset announced via ProteomeXchange.

Title	Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in the Aspergillus niger in Peanuts
Description	Aspergillus niger is a very destructive pathogen causing severe peanut root rot, especially in the seeding stage of peanuts (Arachis hypogaea), and often leading to the death of the plant. Protein lysine 2-hydroxyisobutyrylation (Khib) is a newly detected post-translational modification identified in several species. In this study, we identified 5041 Khib sites on 1453 modified proteins in A. niger. Compared with five other species, A. niger has conserved and novel proteins. Bioinformatics analysis showed that Khib proteins are widely distributed in A. niger and are involved in many biological processes. GO and KEGG enrichment analyses revealed that Khib proteins were significantly enriched in many cellular compartments and pathways, such as ribosomes and proteasome subunits. A total of 223 Knib proteins were part of the PPI network, thus, suggesting that Knib proteins are associated with a large range of protein interactions and diverse pathways in the life processes of A. niger. Several identified proteins are involved in pathogenesis regulation. Our research provides the first comprehensive report of lysine 2-hydroxyisobutyrylation and an extensive database for potential functional studies on Knib proteins in this economically important fungus.
HostingRepository	PRIDE
AnnounceDate	2022-07-31
AnnouncementXML	Submission_2022-07-31_04:54:59.095.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xianliang Ma
SpeciesList	scientific name: Aspergillus aff. niger A2; NCBI TaxID: 1096976;
ModificationList	N-butanoylated residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-09-09 13:49:10	ID requested
⏵ 1	2022-07-31 04:54:59	announced
2	2023-11-14 08:52:40	announced	2023-11-14: Updated project metadata.

10.3389/FMICB.2021.719337;

submitter keyword: Aspergillus niger, lysine 2-hydroxyisobutyrylation, proteome

Yucheng Chi
contact affiliation	Shandong Academy of Agricultural Sciences, Jinan, Shandong, China
contact email	87626681@163.com
lab head
Xianliang Ma
contact affiliation	Micrometer Biotech
contact email	maxianliangyxz@163.com
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD028426
     1. Label: PRIDE project
     2. Name: Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in the Aspergillus niger in Peanuts