PXD027245 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Metaproteomic analysis of two bacterial species |
Description | The species of two bacterial colonies were determined by sequencing their DNA and comparing it with databases. Their adaptation to extreme conditions (conditions similar to those found in the planet Mars) were studied by proteomics, comparing the proteome obtained from a culture under standard laboratory conditions with the proteome obtained from a culture under extreme conditions. The techniques used were 2-DE electrophoresis, Difference in gel electrophoresis (2-D DIGE) and protein analysis by mass spectrometry Matrix Assisted Laser Desorption/ Ionization – Time of Flight (MALDI-TOF). |
HostingRepository | PRIDE |
AnnounceDate | 2023-07-17 |
AnnouncementXML | Submission_2023-07-17_13:19:42.639.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | EvaGarcia |
SpeciesList | scientific name: environmental samples; NCBI TaxID: 48479; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | autoflex |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-07-12 08:17:29 | ID requested | |
⏵ 1 | 2023-07-17 13:19:43 | announced | |
2 | 2023-11-14 07:12:29 | announced | 2023-11-14: Updated project metadata. |
Publication List
Keyword List
submitter keyword: MALDI-TOF MS, culturomics, 2DE, 2-DIGE, metaproteomics |
Contact List
Garcia Lopez Eva; Cid SanchezCristina |
contact affiliation | Microbial Evolution Laboratory, Centro de Astrobiologia (CSIC-INTA), 28850 Torrejón de Ardoz, Madrid, Spain |
contact email | garciale@cab.inta-csic.es |
lab head | |
EvaGarcia |
contact affiliation | ES (+34) 915206455 |
contact email | garciale@cab.inta-csic.es |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD027245 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027245
- Label: PRIDE project
- Name: Metaproteomic analysis of two bacterial species