PXD026598-1

PXD026598 is an original dataset announced via ProteomeXchange.

Title	Parallel reaction monitoring (PRM) analysis for protein expression
Description	According to a previous study on the microscopic examination of stem barks in ramie, bast fibers from different parts of stem bark showed distinct differences at the developmental level: specifically, the barks in the top part of stem (TPS) did not initiate fiber growth, whereas barks in the middle part of stem (MPS) had a large number of fibers with thickening secondary walls. We have performed the phosphoproteome analysis for the tissues of TPS and MPS, and then carried out the comparison of phosphorylation level of proteins between two tissues, thereby to identified differentially phosphorylated proteins. These datasets represent the raw UHPLC spectra for phosphoproteome of ramie TPS and MPS.
HostingRepository	PRIDE
AnnounceDate	2022-02-17
AnnouncementXML	Submission_2022-02-17_08:57:30.516.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zeng Zheng
SpeciesList	scientific name: Boehmeria nivea; NCBI TaxID: 83906;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ

Revision	Datetime	Status	ChangeLog Entry
0	2021-06-09 06:15:19	ID requested
⏵ 1	2022-02-17 08:57:31	announced
2	2024-10-22 05:32:59	announced	2024-10-22: Updated project metadata.

Li F, Zeng Z, Huang R, Wang Y, Liu T, Identification of proteins associated with bast fiber growth of ramie by differential proteomic analysis. BMC Genomics, 22(1):865(2021) [pubmed]

submitter keyword: Proteome, ramie, differential expression

Zeng Zheng
contact affiliation	Hu Nan
contact email	1054648678@qq.com
lab head
Zeng Zheng
contact affiliation	Hu Nan
contact email	1054648678@qq.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD026598

PRIDE project URI

• PRIDE
  1. PXD026598
     1. Label: PRIDE project
     2. Name: Parallel reaction monitoring (PRM) analysis for protein expression