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PXD026239-1

PXD026239 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteins that co-purify with tandem affinity-purified PRC5 in Trypanosoma brucei
DescriptionThe project was to determine the role of a trypanosomatid protein, termed PRC5, in pre-mRNA splicing. PRC5 has no homologs in model organisms but was recurrently co-purified with known splicing factors in Trypanosoma brucei. To determine interacting proteins, PRC5 was C-terminally TAP-tagged (we used the PTP tag) and tandem affinity-purified, and co-purifying proteins identified after separation by SDS-PAGE and in-gel trypsin digest by LC/MS/MS. Many of the enriched proteins were known splicing factors, and sucrose gradient sedimentation identified a complex of five subunits, termed PRP19-related complex or PRC.
HostingRepositoryPRIDE
AnnounceDate2021-12-15
AnnouncementXMLSubmission_2021-12-15_07:44:20.601.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterArthur Gunzl
SpeciesList scientific name: Trypanosoma brucei; NCBI TaxID: 5691;
ModificationListS-carboxamidoethyl-L-cysteine; monohydroxylated residue
InstrumentLTQ Orbitrap Elite
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-05-24 21:57:11ID requested
12021-12-15 07:44:21announced
Publication List
Srivastava A, Ambr, ó, sio DL, Tasak M, Gosavi U, G, ü, nzl A, A distinct complex of PRP19-related and trypanosomatid-specific proteins is required for pre-mRNA splicing in trypanosomes. Nucleic Acids Res, 49(22):12929-12942(2021) [pubmed]
Keyword List
submitter keyword: Trypanosome, spliceosome, PRP19-related complex, Tandem affinity purification, LC/MS/MS
Contact List
Arthur Gunzl
contact affiliationDepartment of Genetics and Genome Sciences University of Connecticut Health Center 400 Farmington Avenue Farmington, CT 06030-6403 USA Phone (860) 679-8878 Fax (860) 679-8345 E-mail gunzl@uchc.edu
contact emailgunzl@uchc.edu
lab head
Arthur Gunzl
contact affiliationUConn Health
contact emailgunzl@uchc.edu
dataset submitter
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Dataset FTP location
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