PXD025836 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Phospho-proteomic characterization of human hepatocellular carcinoma (HCC) tumor biopsies |
| Description | We analyzed the phospho-proteome of tumor and matched non-tumor biopsies from 51 treatment-naive Hepatocellular carcinoma (HCC) patients by label-free DDA. Thereby we aim to find subgroups of patients characterized by specific pathway activation. Furthermore, we aim to find novel factors involved in HCC development and novel biomarkers. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_05:35:27.673.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Eva Dazert |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | Q Exactive HF |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2021-05-06 06:39:54 | ID requested | |
| 1 | 2022-03-15 04:27:01 | announced | |
| ⏵ 2 | 2024-10-22 05:35:28 | announced | 2024-10-22: Updated project metadata. |
| 3 | 2025-05-04 00:07:15 | announced | 2025-05-04: Updated project metadata. |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: Human, QExactive HF, phospho-proteomics, Hepatocellular carcinoma (HCC), Biopsies |
Contact List
| Michael N. Hall |
|---|
| contact affiliation | Department of Growth and Development, Biozentrum, University of Basel, Basel, Switzerland |
| contact email | m.hall@unibas.ch |
| lab head | |
| Eva Dazert |
|---|
| contact affiliation | Biozentrum University of Basel |
| contact email | eva.dazert@unibas.ch |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD025836 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD025836
- Label: PRIDE project
- Name: Phospho-proteomic characterization of human hepatocellular carcinoma (HCC) tumor biopsies
to receive all new ProteomeXchange dataset release announcements!
