PXD025302 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Quantitative proteome analysis reveals changes of membrane proteins in Sedum plumbizincicola under cadmium stress |
Description | Sedum plumbizincicola is an herbaceous species tolerant of excessive cadmium accumulation in above-ground tissues. The implications of membrane proteins, especially integrative membrane proteins such as transporters, in Cd detoxification in plants have received attention in recent years, but a comprehensive profiling of Cd-responsive membrane proteins from Cd hyperaccumulator plants is lacking. In this study, the membrane proteins of root, stem, and leaf tissues of S. plumbizincicola seedlings treated with Cd solution for 0, 1 or 3 days were analyzed by Tandem Mass Tag (TMT) labeling-based proteome quantification. Total 3353 proteins with predicted transmembrane helices were identified and quantified in at least one tissue group |
HostingRepository | PRIDE |
AnnounceDate | 2021-12-30 |
AnnouncementXML | Submission_2021-12-30_14:31:19.140.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Zhiping Deng |
SpeciesList | scientific name: Sedum plumbizincicola; NCBI TaxID: 1532924; |
ModificationList | TMT6plex-126 reporter+balance reagent acylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-04-09 05:35:33 | ID requested | |
⏵ 1 | 2021-12-30 14:31:19 | announced | |
Publication List
Zhu Y, Qiu W, Li Y, Tan J, Han X, Wu L, Jiang Y, Deng Z, Wu C, Zhuo R, Quantitative proteome analysis reveals changes of membrane transport proteins in Sedum plumbizincicola under cadmium stress. Chemosphere, 287(Pt 3):132302(2022) [pubmed] |
Keyword List
submitter keyword: membrane proteome, Sedum plumbizincicola, cadmium stress, TMT labeling |
Contact List
Zhiping Deng |
contact affiliation | Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China |
contact email | zhipingdeng@126.com |
lab head | |
Zhiping Deng |
contact affiliation | Zhejiang Academy of Agricultural Sciences |
contact email | zhipingdeng@126.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
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[ - ]
- PRIDE
- PXD025302
- Label: PRIDE project
- Name: Quantitative proteome analysis reveals changes of membrane proteins in Sedum plumbizincicola under cadmium stress