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PXD025103-1

PXD025103 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleChemical and Random Additive Noise Elimination (CRANE) - Case Study - Matrisome Dataset
DescriptionThe effectiveness of the novel electrospray ionisation - liquid chromatography mass spectrometry (ESI-LC-MS) data de-noising technique, CRANE, is demonstrated by denoising the MS1 and all the MS2 windows of a matrisome, data-independent acquisi-tion (DIA) MS dataset from Krasny, et al. (2018).
HostingRepositoryPRIDE
AnnounceDate2021-07-26
AnnouncementXMLSubmission_2021-07-26_08:04:58.359.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAkila Seneviratne
SpeciesList scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationListiodoacetamide derivatized residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-03-30 04:52:36ID requested
12021-07-26 08:04:59announced
Publication List
Krasny L, Bland P, Kogata N, Wai P, Howard BA, Natrajan RC, Huang PH, SWATH mass spectrometry as a tool for quantitative profiling of the matrisome. J Proteomics, 189():11-22(2018) [pubmed]
Keyword List
submitter keyword: DIA, LC-MSMS, Chemical Noise, Random Noise, Baseline Noise
Contact List
Qing Zhong
contact affiliationChildren’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead, NSW 2145, Australia
contact emailqzhong@cmri.org.au
lab head
Akila Seneviratne
contact affiliationChildren's Medical Research Institute, Westmead, NSW 2145
contact emailaseneviratne@cmri.org.au
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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