PXD024809 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Immunopeptidomics DIA and DDA Dynamic Range Experiment |
| Description | The peptide identification sensitivity of the affinity purified immunopeptidome of a JY cell line (Epstein–Barr virus-immortalized B cell lymphoblastoid line, ECACC 94022533, IHW9287) for DDA and DIA experiments was assessed by a linear concentration series. JY cells are homozygous for all HLA-I loci (HLA-A*02:01, HLA-B*07:02, and HLA-C*07:02). The JY HLA-I ligandome was isolated through immunoaffinity purification, as described in Marcu, Bichmann and Kuchenbecker et al 2021. |
| HostingRepository | PRIDE |
| AnnounceDate | 2025-09-04 |
| AnnouncementXML | Submission_2025-09-03_19:42:13.001.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Ana Marcu |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | monohydroxylated residue |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2021-03-17 11:22:37 | ID requested | |
| ⏵ 1 | 2025-09-03 19:42:13 | announced | |
Publication List
Keyword List
| submitter keyword: dynamic range, DIA, immunopeptidomics,HLA |
Contact List
| Hans-Georg Rammensee |
|---|
| contact affiliation | Institute for Cell Biology Dept. Immunology Auf der Morgenstelle 15, 72076 Tübingen Germany Partner Site of the German Cancer Consortium |
| contact email | rammensee@uni-tuebingen.de |
| lab head | |
| Ana Marcu |
|---|
| contact affiliation | University of Tübingen, Interfaculty Institute for Cell Biology, Department of Immunology |
| contact email | anamarcu.pe@gmail.com |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD024809 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD024809
- Label: PRIDE project
- Name: Immunopeptidomics DIA and DDA Dynamic Range Experiment
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