PXD024627-2

PXD024627 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic analysis of three medically important Nigerian Naja (Naja haje, Naja katiensis and Naja nigricollis) snake venoms
Description	The venom proteomes of three medically important Nigerian Elapidae snakes Naja haje, Naja katiensis and Naja nigricollis was studied using Hydrophilic Interaction Liquid Chromatography (HILIC) coupled with LC-MS/MS analysis. Peptides/Proteins were identified and characterised using the SEQUEST and X!Tandem algorithms incorporated on to the Scaffold proteome software version 4.10.0. The Nigerian elapid species studied displayed about 70% similarity in composition of their venoms.
HostingRepository	PRIDE
AnnounceDate	2021-03-12
AnnouncementXML	Submission_2021-03-29_02:51:24.990.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD024627
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Fatima Adamude Amin
SpeciesList	scientific name: Naja katiensis; NCBI TaxID: 409859; scientific name: Naja haje; NCBI TaxID: 8639; scientific name: Naja nigricollis; NCBI TaxID: 8654;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-03-10 02:19:17	ID requested
1	2021-03-11 22:36:13	announced
⏵ 2	2021-03-29 02:51:25	announced	2021-03-29: Updated publication reference for DOI(s): 10.1016/j.toxicon.2021.03.014.
3	2023-11-14 08:52:03	announced	2023-11-14: Updated project metadata.

Publication List

10.1016/j.toxicon.2021.03.014;

10.1016/j.toxicon.2021.03.014;

Keyword List

submitter keyword: Proteomics
Nigerian Elapidae
Venom Proteome
Naja haje
Naja katiensis
Naja nigricollis
Actiflagelin
Cathelicidin
Cystatin.

submitter keyword: Proteomics

Nigerian Elapidae

Venom Proteome

Naja haje

Naja katiensis

Naja nigricollis

Actiflagelin

Cathelicidin

Cystatin.

Contact List

Emeka John Dingwoke
contact affiliation	Department of Biochemistry/ Venom, Antivenom and Natural Toxins Research Center, Ahmadu Bello University, Zaria
contact email	dinhimself@yahoo.com
lab head
Fatima Adamude Amin
contact affiliation	Federal University of Lafia, Nasarawa State, Nigeria
contact email	fatteeyjibamin@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/03/PXD024627
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/03/PXD024627

PRIDE project URI

Repository Record List

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