PXD024359 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomic Clustering Reveals the Kinetics of Disease Biomarkers in Bovine and Human Models of Post-Traumatic Osteoarthritis |
Description | Objectives: In this study, we applied a clustering method to two proteomic data sets from bovine (PRIDE PXD020756) and human models (this repository) of post-traumatic osteoarthritis (PTOA) to distinguish distinct clusters of proteins based on their kinetics of release from cartilage and examined these clusters for PTOA biomarker candidates. We quantified the effects of dexamethasone (Dex) on the kinetics of release of the cartilage media proteome. |
HostingRepository | PRIDE |
AnnounceDate | 2021-07-23 |
AnnouncementXML | Submission_2021-07-22_22:57:00.588.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Patrik Onnerfjord |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-02-24 08:06:31 | ID requested | |
⏵ 1 | 2021-07-22 22:57:00 | announced | |
2 | 2022-03-14 08:15:24 | announced | 2022-03-14: Updated publication reference for DOI(s): doi.org/10.1016/j.ocarto.2021.100191. |
3 | 2023-11-14 08:52:40 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: human cartilage, osteoarthritis, explant model |
Contact List
Patrik Onnerfjord |
contact affiliation | Clinical Sciences, Lund University, Sweden |
contact email | patrik.onnerfjord@med.lu.se |
lab head | |
Patrik Onnerfjord |
contact affiliation | Lund University |
contact email | patrik.onnerfjord@med.lu.se |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/07/PXD024359 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD024359
- Label: PRIDE project
- Name: Proteomic Clustering Reveals the Kinetics of Disease Biomarkers in Bovine and Human Models of Post-Traumatic Osteoarthritis